J3_9SYH_019
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 9SYH|1|a|A|504, 9SYH|1|a|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYH|1|a|G|30
9SYH|1|a|C|31
*
9SYH|1|a|G|474
9SYH|1|a|C|475
9SYH|1|a|G|476
9SYH|1|a|A|477
9SYH|1|a|A|478
9SYH|1|a|A|479
9SYH|1|a|A|480
9SYH|1|a|G|481
9SYH|1|a|A|482
9SYH|1|a|A|483
9SYH|1|a|C|484
*
9SYH|1|a|G|496
9SYH|1|a|A|497
9SYH|1|a|G|498
9SYH|1|a|U|499
9SYH|1|a|G|500
9SYH|1|a|A|501
9SYH|1|a|A|502
9SYH|1|a|A|503
9SYH|1|a|A|504
9SYH|1|a|A|505
9SYH|1|a|G|506
9SYH|1|a|A|507
9SYH|1|a|A|508
9SYH|1|a|C|509
9SYH|1|a|C|510
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain p
- Large ribosomal subunit protein bL20
- Chain r
- Large ribosomal subunit protein uL22
- Chain t
- Large ribosomal subunit protein uL24
Coloring options: