J3_9SYH_035

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9SYH|1|a|U|2833, 9SYH|1|a|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|a|G|2812
9SYH|1|a|A|2813
9SYH|1|a|A|2814
9SYH|1|a|C|2815
*
9SYH|1|a|G|2831
9SYH|1|a|U|2832
9SYH|1|a|U|2833
9SYH|1|a|G|2834
9SYH|1|a|A|2835
9SYH|1|a|U|2836
*
9SYH|1|a|A|2882
9SYH|1|a|A|2883
9SYH|1|a|U|2884
9SYH|1|a|G|2885
9SYH|1|a|A|2886
9SYH|1|a|A|2887
9SYH|1|a|C|2888

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain m

Large ribosomal subunit protein bL17

Chain z

Large ribosomal subunit protein bL32