J3_9T0Y_001

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GC*GGAAUAU*AGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|A|G|46
9T0Y|1|A|C|47
*
9T0Y|1|A|G|361
9T0Y|1|A|G|362
9T0Y|1|A|A|363
9T0Y|1|A|A|364
9T0Y|1|A|U|365
9T0Y|1|A|A|366
9T0Y|1|A|U|367
*
9T0Y|1|A|A|393
9T0Y|1|A|G|394
9T0Y|1|A|C|395

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain P

Small ribosomal subunit protein bS16