J3_9T0Y_023

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

9T0Y|1|a|U|686, 9T0Y|1|a|A|792, 9T0Y|1|a|A|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|a|U|683
9T0Y|1|a|G|684
9T0Y|1|a|A|685
9T0Y|1|a|U|686
9T0Y|1|a|C|687
9T0Y|1|a|U|688
9T0Y|1|a|A|689
*
9T0Y|1|a|U|773
9T0Y|1|a|G|774
9T0Y|1|a|G|775
*
9T0Y|1|a|C|791
9T0Y|1|a|A|792
9T0Y|1|a|A|793
9T0Y|1|a|A|794

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain c

Large ribosomal subunit protein uL2

Chain e

Large ribosomal subunit protein uL4