3D structure

PDB id
9T5X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
GAAC*GUUGAU*AAUGAAC
Length
17 nucleotides
Bulged bases
9T5X|1|a|U|2833, 9T5X|1|a|A|2835, 9T5X|1|a|U|2884, 9T5X|1|a|G|2885
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T5X|1|a|G|2812
9T5X|1|a|A|2813
9T5X|1|a|A|2814
9T5X|1|a|C|2815
*
9T5X|1|a|G|2831
9T5X|1|a|U|2832
9T5X|1|a|U|2833
9T5X|1|a|G|2834
9T5X|1|a|A|2835
9T5X|1|a|U|2836
*
9T5X|1|a|A|2882
9T5X|1|a|A|2883
9T5X|1|a|U|2884
9T5X|1|a|G|2885
9T5X|1|a|A|2886
9T5X|1|a|A|2887
9T5X|1|a|C|2888

Current chains

Chain a
23S rRNA

Nearby chains

Chain d
Large ribosomal subunit protein uL3
Chain m
Large ribosomal subunit protein bL17
Chain r
Large ribosomal subunit protein uL22
Chain z
Large ribosomal subunit protein bL32

Coloring options:

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