J3_9T7H_026

3D structure

PDB id

9T7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CAAG*CUAGUACC*GCGAAUACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T7H|1|2|C|908
9T7H|1|2|A|909
9T7H|1|2|A|910
9T7H|1|2|G|911
*
9T7H|1|2|C|1318
9T7H|1|2|U|1319
9T7H|1|2|A|1320
9T7H|1|2|G|1321
9T7H|1|2|U|1322
9T7H|1|2|A|1323
9T7H|1|2|C|1324
9T7H|1|2|C|1325
*
9T7H|1|2|G|1345
9T7H|1|2|C|1346
9T7H|1|2|G|1347
9T7H|1|2|A|1348
9T7H|1|2|A|1349
9T7H|1|2|U|1350
9T7H|1|2|A|1351
9T7H|1|2|C|1352
9T7H|1|2|G|1353

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AH

30S ribosomal protein S7

Chain AK

30S ribosomal protein S9

Chain AU

30S ribosomal protein S19e

Chain AX

30S ribosomal protein S28e