J3_9TI6_027
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI6_027 not in the Motif Atlas
- Homologous match to J3_6CZR_019
- Geometric discrepancy: 0.1477
- The information below is about J3_6CZR_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TI6|1|a|U|952
9TI6|1|a|G|953
9TI6|1|a|G|954
9TI6|1|a|A|955
*
9TI6|1|a|U|1245
9TI6|1|a|A|1246
9TI6|1|a|C|1247
*
9TI6|1|a|G|1347
9TI6|1|a|G|1348
9TI6|1|a|A|1349
9TI6|1|a|A|1350
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain j
- 30S ribosomal protein S9
- Chain n
- 30S ribosomal protein S13
Coloring options: