J3_9TI9_033
3D structure
- PDB id
- 9TI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UAA*UGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 9TI9|1|a|U|1193
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI9_033 not in the Motif Atlas
- Geometric match to J3_8B0X_012
- Geometric discrepancy: 0.2445
- The information below is about J3_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.7
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
9TI9|1|a|U|1127
9TI9|1|a|A|1128
9TI9|1|a|A|1129
*
9TI9|1|a|U|1165
9TI9|1|a|G|1166
9TI9|1|a|A|1167
9TI9|1|a|C|1168
*
9TI9|1|a|G|1191
9TI9|1|a|G|1192
9TI9|1|a|U|1193
9TI9|1|a|G|1194
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- 30S ribosomal protein S14 type Z
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