J3_9TI9_035

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CAAUG*CUCAGUUCGGAUUG*CAUGAAGCUG

Length

29 nucleotides

Bulged bases

9TI9|1|a|U|1250, 9TI9|1|a|U|1312

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI9|1|a|C|1247
9TI9|1|a|A|1248
9TI9|1|a|A|1249
9TI9|1|a|U|1250
9TI9|1|a|G|1251
*
9TI9|1|a|C|1306
9TI9|1|a|U|1307
9TI9|1|a|C|1308
9TI9|1|a|A|1309
9TI9|1|a|G|1310
9TI9|1|a|U|1311
9TI9|1|a|U|1312
9TI9|1|a|C|1313
9TI9|1|a|G|1314
9TI9|1|a|G|1315
9TI9|1|a|A|1316
9TI9|1|a|U|1317
9TI9|1|a|U|1318
9TI9|1|a|G|1319
*
9TI9|1|a|C|1338
9TI9|1|a|A|1339
9TI9|1|a|U|1340
9TI9|1|a|G|1341
9TI9|1|a|A|1342
9TI9|1|a|A|1343
9TI9|1|a|G|1344
9TI9|1|a|C|1345
9TI9|1|a|U|1346
9TI9|1|a|G|1347

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S7

Chain n

30S ribosomal protein S13