J3_9TKN_009
3D structure
- PDB id
- 9TKN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 and IF1 bound (30S PIC-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 9TKN|1|D1|A|975, 9TKN|1|D1|G|976, 9TKN|1|D1|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKN|1|D1|U|955
9TKN|1|D1|U|956
9TKN|1|D1|U|957
9TKN|1|D1|A|958
9TKN|1|D1|A|959
9TKN|1|D1|U|960
9TKN|1|D1|U|961
9TKN|1|D1|C|962
*
9TKN|1|D1|G|973
9TKN|1|D1|A|974
9TKN|1|D1|A|975
9TKN|1|D1|G|976
9TKN|1|D1|A|977
9TKN|1|D1|A|978
9TKN|1|D1|C|979
9TKN|1|D1|C|980
9TKN|1|D1|U|981
9TKN|1|D1|U|982
9TKN|1|D1|A|983
9TKN|1|D1|C|984
*
9TKN|1|D1|G|1221
9TKN|1|D1|G|1222
9TKN|1|D1|C|1223
9TKN|1|D1|U|1224
9TKN|1|D1|A|1225
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AI
- Small ribosomal subunit protein uS10
- Chain AL
- Small ribosomal subunit protein uS13
- Chain AM
- Small ribosomal subunit protein uS14
- Chain AR
- Small ribosomal subunit protein uS19
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