J3_9TKN_013
3D structure
- PDB id
- 9TKN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 and IF1 bound (30S PIC-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKN|1|D1|C|1063
9TKN|1|D1|G|1064
9TKN|1|D1|U|1065
9TKN|1|D1|C|1066
9TKN|1|D1|A|1067
9TKN|1|D1|G|1068
*
9TKN|1|D1|C|1107
9TKN|1|D1|G|1108
9TKN|1|D1|C|1109
9TKN|1|D1|A|1110
9TKN|1|D1|A|1111
9TKN|1|D1|C|1112
9TKN|1|D1|C|1113
*
9TKN|1|D1|G|1187
9TKN|1|D1|A|1188
9TKN|1|D1|U|1189
9TKN|1|D1|G|1190
9TKN|1|D1|A|1191
9TKN|1|D1|C|1192
9TKN|1|D1|G|1193
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AB
- Small ribosomal subunit protein uS3
- Chain AD
- Small ribosomal subunit protein uS5
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AH
- Small ribosomal subunit protein uS9
- Chain AI
- Small ribosomal subunit protein uS10
- Chain AM
- Small ribosomal subunit protein uS14
Coloring options: