J3_9TKP_017

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

9TKP|1|D1|U|1240, 9TKP|1|D1|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D1|C|1237
9TKP|1|D1|A|1238
9TKP|1|D1|A|1239
9TKP|1|D1|U|1240
9TKP|1|D1|G|1241
*
9TKP|1|D1|C|1296
9TKP|1|D1|G|1297
9TKP|1|D1|U|1298
9TKP|1|D1|A|1299
9TKP|1|D1|G|1300
9TKP|1|D1|U|1301
9TKP|1|D1|C|1302
9TKP|1|D1|C|1303
*
9TKP|1|D1|G|1334
9TKP|1|D1|U|1335
9TKP|1|D1|C|1336
9TKP|1|D1|G|1337

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AF

Small ribosomal subunit protein uS7

Chain AL

Small ribosomal subunit protein uS13