J3_9TKP_018

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GC*GCGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|G|30
9TKP|1|D2|C|31
*
9TKP|1|D2|G|474
9TKP|1|D2|C|475
9TKP|1|D2|G|476
9TKP|1|D2|A|477
9TKP|1|D2|A|478
9TKP|1|D2|A|479
9TKP|1|D2|A|480
9TKP|1|D2|G|481
*
9TKP|1|D2|C|509
9TKP|1|D2|C|510

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BT

Large ribosomal subunit protein bL20

Chain BX

Large ribosomal subunit protein uL24