J3_9TKP_022

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

9TKP|1|D2|U|321, 9TKP|1|D2|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|G|297
9TKP|1|D2|G|298
9TKP|1|D2|A|299
9TKP|1|D2|A|300
9TKP|1|D2|G|301
*
9TKP|1|D2|C|316
9TKP|1|D2|G|317
9TKP|1|D2|C|318
9TKP|1|D2|G|319
9TKP|1|D2|A|320
9TKP|1|D2|U|321
9TKP|1|D2|A|322
9TKP|1|D2|C|323
9TKP|1|D2|A|324
9TKP|1|D2|G|325
*
9TKP|1|D2|C|337
9TKP|1|D2|G|338
9TKP|1|D2|U|339
9TKP|1|D2|A|340
9TKP|1|D2|C|341

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BD

Large ribosomal subunit protein uL4

Chain BX

Large ribosomal subunit protein uL24