J3_9TKP_033

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

9TKP|1|D2|A|2518, 9TKP|1|D2|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|C|2517
9TKP|1|D2|A|2518
9TKP|1|D2|U|2519
9TKP|1|D2|C|2520
*
9TKP|1|D2|G|2545
9TKP|1|D2|U|2546
9TKP|1|D2|A|2547
*
9TKP|1|D2|U|2561
9TKP|1|D2|U|2562
9TKP|1|D2|U|2563
9TKP|1|D2|A|2564
9TKP|1|D2|A|2565
9TKP|1|D2|A|2566
9TKP|1|D2|G|2567

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BN

Large ribosomal subunit protein uL14