J3_9TKQ_015
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 9TKQ|1|D1|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D1|U|1116
9TKQ|1|D1|A|1117
9TKQ|1|D1|U|1118
*
9TKQ|1|D1|A|1155
9TKQ|1|D1|G|1156
9TKQ|1|D1|A|1157
9TKQ|1|D1|C|1158
9TKQ|1|D1|U|1159
9TKQ|1|D1|G|1160
9TKQ|1|D1|C|1161
*
9TKQ|1|D1|G|1175
9TKQ|1|D1|A|1176
9TKQ|1|D1|G|1177
9TKQ|1|D1|G|1178
9TKQ|1|D1|A|1179
9TKQ|1|D1|A|1180
9TKQ|1|D1|G|1181
9TKQ|1|D1|G|1182
9TKQ|1|D1|U|1183
9TKQ|1|D1|G|1184
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AA
- Small ribosomal subunit protein uS2
- Chain AH
- Small ribosomal subunit protein uS9
- Chain AI
- Small ribosomal subunit protein uS10
- Chain AM
- Small ribosomal subunit protein uS14
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