J3_9TKQ_017

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GC*GCGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|G|30
9TKQ|1|D2|C|31
*
9TKQ|1|D2|G|474
9TKQ|1|D2|C|475
9TKQ|1|D2|G|476
9TKQ|1|D2|A|477
9TKQ|1|D2|A|478
9TKQ|1|D2|A|479
9TKQ|1|D2|A|480
9TKQ|1|D2|G|481
*
9TKQ|1|D2|C|509
9TKQ|1|D2|C|510

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BT

Large ribosomal subunit protein bL20

Chain BX

Large ribosomal subunit protein uL24