J3_9TKQ_018
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 9TKQ|1|D2|A|504, 9TKQ|1|D2|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D2|G|30
9TKQ|1|D2|C|31
*
9TKQ|1|D2|G|474
9TKQ|1|D2|C|475
9TKQ|1|D2|G|476
9TKQ|1|D2|A|477
9TKQ|1|D2|A|478
9TKQ|1|D2|A|479
9TKQ|1|D2|A|480
9TKQ|1|D2|G|481
9TKQ|1|D2|A|482
9TKQ|1|D2|A|483
9TKQ|1|D2|C|484
*
9TKQ|1|D2|G|496
9TKQ|1|D2|A|497
9TKQ|1|D2|G|498
9TKQ|1|D2|U|499
9TKQ|1|D2|G|500
9TKQ|1|D2|A|501
9TKQ|1|D2|A|502
9TKQ|1|D2|A|503
9TKQ|1|D2|A|504
9TKQ|1|D2|A|505
9TKQ|1|D2|G|506
9TKQ|1|D2|A|507
9TKQ|1|D2|A|508
9TKQ|1|D2|C|509
9TKQ|1|D2|C|510
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain BT
- Large ribosomal subunit protein bL20
- Chain BV
- Large ribosomal subunit protein uL22
- Chain BX
- Large ribosomal subunit protein uL24
Coloring options: