J3_9TKQ_022
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAUCUA*UGG*CAAA
- Length
- 14 nucleotides
- Bulged bases
- 9TKQ|1|D2|U|686, 9TKQ|1|D2|A|792, 9TKQ|1|D2|A|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D2|U|683
9TKQ|1|D2|G|684
9TKQ|1|D2|A|685
9TKQ|1|D2|U|686
9TKQ|1|D2|C|687
9TKQ|1|D2|U|688
9TKQ|1|D2|A|689
*
9TKQ|1|D2|U|773
9TKQ|1|D2|G|774
9TKQ|1|D2|G|775
*
9TKQ|1|D2|C|791
9TKQ|1|D2|A|792
9TKQ|1|D2|A|793
9TKQ|1|D2|A|794
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B7
- Large ribosomal subunit protein bL34
- Chain BB
- Large ribosomal subunit protein uL2
- Chain BD
- Large ribosomal subunit protein uL4
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