J3_9TKQ_024

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|G|1055
9TKQ|1|D2|G|1056
9TKQ|1|D2|A|1057
*
9TKQ|1|D2|U|1081
9TKQ|1|D2|U|1082
9TKQ|1|D2|U|1083
9TKQ|1|D2|A|1084
9TKQ|1|D2|A|1085
9TKQ|1|D2|A|1086
9TKQ|1|D2|G|1087
*
9TKQ|1|D2|C|1102
9TKQ|1|D2|A|1103
9TKQ|1|D2|C|1104

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B9

Large ribosomal subunit protein bL36A

Chain BK

50S ribosomal protein L11