J3_9TKQ_028

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|G|1424
9TKQ|1|D2|G|1425
9TKQ|1|D2|G|1426
9TKQ|1|D2|A|1427
9TKQ|1|D2|C|1428
9TKQ|1|D2|G|1429
*
9TKQ|1|D2|C|1564
9TKQ|1|D2|C|1565
*
9TKQ|1|D2|G|1568
9TKQ|1|D2|A|1569
9TKQ|1|D2|A|1570
9TKQ|1|D2|A|1571
9TKQ|1|D2|A|1572
9TKQ|1|D2|G|1573
9TKQ|1|D2|C|1574

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2