J3_9TKQ_032

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

9TKQ|1|D2|A|2518, 9TKQ|1|D2|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|C|2517
9TKQ|1|D2|A|2518
9TKQ|1|D2|U|2519
9TKQ|1|D2|C|2520
*
9TKQ|1|D2|G|2545
9TKQ|1|D2|U|2546
9TKQ|1|D2|A|2547
*
9TKQ|1|D2|U|2561
9TKQ|1|D2|U|2562
9TKQ|1|D2|U|2563
9TKQ|1|D2|A|2564
9TKQ|1|D2|A|2565
9TKQ|1|D2|A|2566
9TKQ|1|D2|G|2567

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L3

Chain BN

Large ribosomal subunit protein uL14