J3_9TKQ_034
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9TKQ|1|D2|U|2833, 9TKQ|1|D2|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D2|G|2812
9TKQ|1|D2|A|2813
9TKQ|1|D2|A|2814
9TKQ|1|D2|C|2815
*
9TKQ|1|D2|G|2831
9TKQ|1|D2|U|2832
9TKQ|1|D2|U|2833
9TKQ|1|D2|G|2834
9TKQ|1|D2|A|2835
9TKQ|1|D2|U|2836
*
9TKQ|1|D2|A|2882
9TKQ|1|D2|A|2883
9TKQ|1|D2|U|2884
9TKQ|1|D2|G|2885
9TKQ|1|D2|A|2886
9TKQ|1|D2|A|2887
9TKQ|1|D2|C|2888
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- Large ribosomal subunit protein bL32
- Chain BC
- 50S ribosomal protein L3
- Chain BQ
- Large ribosomal subunit protein bL17
- Chain BV
- Large ribosomal subunit protein uL22
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