J3_9TNL_032

3D structure

PDB id

9TNL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

9TNL|1|a|U|2334, 9TNL|1|a|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TNL|1|a|C|2295
9TNL|1|a|U|2296
9TNL|1|a|A|2297
9TNL|1|a|A|2298
9TNL|1|a|U|2299
*
9TNL|1|a|A|2317
9TNL|1|a|G|2318
9TNL|1|a|G|2319
9TNL|1|a|U|2320
9TNL|1|a|U|2321
9TNL|1|a|A|2322
9TNL|1|a|G|2323
*
9TNL|1|a|C|2332
9TNL|1|a|A|2333
9TNL|1|a|U|2334
9TNL|1|a|A|2335
9TNL|1|a|A|2336
9TNL|1|a|G|2337

Current chains

Chain a

23S rRNA

Nearby chains

Chain b

5S ribosomal RNA; 5S rRNA

Chain f

Large ribosomal subunit protein uL5

Chain n

Large ribosomal subunit protein uL18

Chain v

Large ribosomal subunit protein bL27