J3_9TNL_035

3D structure

PDB id

9TNL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9TNL|1|a|U|2833, 9TNL|1|a|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TNL|1|a|G|2812
9TNL|1|a|A|2813
9TNL|1|a|A|2814
9TNL|1|a|C|2815
*
9TNL|1|a|G|2831
9TNL|1|a|U|2832
9TNL|1|a|U|2833
9TNL|1|a|G|2834
9TNL|1|a|A|2835
9TNL|1|a|U|2836
*
9TNL|1|a|A|2882
9TNL|1|a|A|2883
9TNL|1|a|U|2884
9TNL|1|a|G|2885
9TNL|1|a|A|2886
9TNL|1|a|A|2887
9TNL|1|a|C|2888

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain m

Large ribosomal subunit protein bL17

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32