J3_9TQA_034

3D structure

PDB id

9TQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, trapped conformational ground state of SSU-h44 apical loop, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.06 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9TQA|1|a|U|2833, 9TQA|1|a|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TQA|1|a|G|2812
9TQA|1|a|A|2813
9TQA|1|a|A|2814
9TQA|1|a|C|2815
*
9TQA|1|a|G|2831
9TQA|1|a|U|2832
9TQA|1|a|U|2833
9TQA|1|a|G|2834
9TQA|1|a|A|2835
9TQA|1|a|U|2836
*
9TQA|1|a|A|2882
9TQA|1|a|A|2883
9TQA|1|a|U|2884
9TQA|1|a|G|2885
9TQA|1|a|A|2886
9TQA|1|a|A|2887
9TQA|1|a|C|2888

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain m

Large ribosomal subunit protein bL17

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32