J3_9TT7_018

3D structure

PDB id

9TT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome of WT EBV infected human B-cells

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

9TT7|1|L5|A|4450, 9TT7|1|L5|U|4451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TT7|1|L5|U|4449
9TT7|1|L5|A|4450
9TT7|1|L5|U|4451
9TT7|1|L5|C|4452
*
9TT7|1|L5|G|4477
9TT7|1|L5|U|4478
9TT7|1|L5|U|4479
*
9TT7|1|L5|A|4493
9TT7|1|L5|C|4494
9TT7|1|L5|U|4495
9TT7|1|L5|A|4496
9TT7|1|L5|A|4497
9TT7|1|L5|U|4498
9TT7|1|L5|A|4499

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23