J3_9TV2_020
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 9TV2|1|L8|A|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L8|A|44
9TV2|1|L8|C|45
*
9TV2|1|L8|G|58
9TV2|1|L8|A|59
9TV2|1|L8|G|60
9TV2|1|L8|A|61
9TV2|1|L8|A|62
9TV2|1|L8|U|63
9TV2|1|L8|U|64
*
9TV2|1|L8|A|95
9TV2|1|L8|C|96
9TV2|1|L8|A|97
9TV2|1|L8|C|98
9TV2|1|L8|U|99
Current chains
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain LX
- 60S ribosomal protein L23a
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- Large ribosomal subunit protein eL37
- Chain Ll
- 60S ribosomal protein L39
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