J3_9TZ9_007

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CGAUCUA*UAGGAG*CUAAUCAAG

Length

22 nucleotides

Bulged bases

9TZ9|1|a|U|693, 9TZ9|1|a|A|796, 9TZ9|1|a|U|797, 9TZ9|1|a|A|799

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ9|1|a|C|690
9TZ9|1|a|G|691
9TZ9|1|a|A|692
9TZ9|1|a|U|693
9TZ9|1|a|C|694
9TZ9|1|a|U|695
9TZ9|1|a|A|696
*
9TZ9|1|a|U|780
9TZ9|1|a|A|781
9TZ9|1|a|G|782
9TZ9|1|a|G|783
9TZ9|1|a|A|784
9TZ9|1|a|G|785
*
9TZ9|1|a|C|793
9TZ9|1|a|U|794
9TZ9|1|a|A|795
9TZ9|1|a|A|796
9TZ9|1|a|U|797
9TZ9|1|a|C|798
9TZ9|1|a|A|799
9TZ9|1|a|A|800
9TZ9|1|a|G|801

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain j

Large ribosomal subunit protein uL22

Chain o

Large ribosomal subunit protein uL2

Chain y

Large ribosomal subunit protein bL34