J3_9UWH_007

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCG*CAAUUAAC*GUC

Length

14 nucleotides

Bulged bases

9UWH|1|A|C|2344, 9UWH|1|A|U|2372, 9UWH|1|A|A|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|A|G|2343
9UWH|1|A|C|2344
9UWH|1|A|G|2345
*
9UWH|1|A|C|2368
9UWH|1|A|A|2369
9UWH|1|A|A|2370
9UWH|1|A|U|2371
9UWH|1|A|U|2372
9UWH|1|A|A|2373
9UWH|1|A|A|2374
9UWH|1|A|C|2375
*
9UWH|1|A|G|2421
9UWH|1|A|U|2422
9UWH|1|A|C|2423

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 9

Large ribosomal subunit protein mL41

Chain U

Large ribosomal subunit protein uL23m

Chain Y

Large ribosomal subunit protein uL29m

Chain s

Large ribosomal subunit protein mL65