J3_9UWH_016

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

9UWH|1|AA|U|1369, 9UWH|1|AA|C|1385, 9UWH|1|AA|U|1386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|AA|C|1366
9UWH|1|AA|A|1367
9UWH|1|AA|U|1368
9UWH|1|AA|U|1369
9UWH|1|AA|U|1370
*
9UWH|1|AA|A|1382
9UWH|1|AA|A|1383
9UWH|1|AA|A|1384
9UWH|1|AA|C|1385
9UWH|1|AA|U|1386
9UWH|1|AA|A|1387
9UWH|1|AA|C|1388
*
9UWH|1|AA|G|1418
9UWH|1|AA|G|1419
9UWH|1|AA|U|1420
9UWH|1|AA|G|1421

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

Small ribosomal subunit protein uS7m

Chain AX

Small ribosomal subunit protein mS29

Chain f

Large ribosomal subunit protein mL48