J3_9VVI_016
3D structure
- PDB id
- 9VVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of SecM-arrested 70S ribosome with YheS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UUAU*AGACUGC*GAGGAAGGUGG
- Length
- 22 nucleotides
- Bulged bases
- 9VVI|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VVI|1|A|U|1115
9VVI|1|A|U|1116
9VVI|1|A|A|1117
9VVI|1|A|U|1118
*
9VVI|1|A|A|1155
9VVI|1|A|G|1156
9VVI|1|A|A|1157
9VVI|1|A|C|1158
9VVI|1|A|U|1159
9VVI|1|A|G|1160
9VVI|1|A|C|1161
*
9VVI|1|A|G|1175
9VVI|1|A|A|1176
9VVI|1|A|G|1177
9VVI|1|A|G|1178
9VVI|1|A|A|1179
9VVI|1|A|A|1180
9VVI|1|A|G|1181
9VVI|1|A|G|1182
9VVI|1|A|U|1183
9VVI|1|A|G|1184
9VVI|1|A|G|1185
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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