J3_9VXM_008
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCA*UCAAUUGAUCC*GACCAAC
- Length
- 21 nucleotides
- Bulged bases
- 9VXM|1|A|U|2895, 9VXM|1|A|A|2914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|A|G|2846
9VXM|1|A|C|2847
9VXM|1|A|A|2848
*
9VXM|1|A|U|2890
9VXM|1|A|C|2891
9VXM|1|A|A|2892
9VXM|1|A|A|2893
9VXM|1|A|U|2894
9VXM|1|A|U|2895
9VXM|1|A|G|2896
9VXM|1|A|A|2897
9VXM|1|A|U|2898
9VXM|1|A|C|2899
9VXM|1|A|C|2900
*
9VXM|1|A|G|2909
9VXM|1|A|A|2910
9VXM|1|A|C|2911
9VXM|1|A|C|2912
9VXM|1|A|A|2913
9VXM|1|A|A|2914
9VXM|1|A|C|2915
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL33m
- Chain 3
- Large ribosomal subunit protein bL35m
- Chain M
- Large ribosomal subunit protein uL15m
- Chain W
- Large ribosomal subunit protein bL27m
- Chain X
- Large ribosomal subunit protein bL28m
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