J3_9VXM_010
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUCU*ACCCCAG*CAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|AA|C|677
9VXM|1|AA|U|678
9VXM|1|AA|C|679
9VXM|1|AA|U|680
*
9VXM|1|AA|A|866
9VXM|1|AA|C|867
9VXM|1|AA|C|868
9VXM|1|AA|C|869
9VXM|1|AA|C|870
9VXM|1|AA|A|871
9VXM|1|AA|G|872
*
9VXM|1|AA|C|917
9VXM|1|AA|A|918
9VXM|1|AA|A|919
9VXM|1|AA|G|920
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AJ
- Small ribosomal subunit protein uS12m
- Chain AO
- Small ribosomal subunit protein mS40
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