J3_9VXM_011
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUU*AUUAACCU*AGC
- Length
- 15 nucleotides
- Bulged bases
- 9VXM|1|AA|A|688
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|AA|G|687
9VXM|1|AA|A|688
9VXM|1|AA|U|689
9VXM|1|AA|U|690
*
9VXM|1|AA|A|823
9VXM|1|AA|U|824
9VXM|1|AA|U|825
9VXM|1|AA|A|826
9VXM|1|AA|A|827
9VXM|1|AA|C|828
9VXM|1|AA|C|829
9VXM|1|AA|U|830
*
9VXM|1|AA|A|856
9VXM|1|AA|G|857
9VXM|1|AA|C|858
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AJ
- Small ribosomal subunit protein uS12m
- Chain AM
- Small ribosomal subunit protein bS16m
- Chain AT
- Small ribosomal subunit protein mS25
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