J3_9WNR_012

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GGAAGU*AUGUGC*GAACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|A|G|1002
9WNR|1|A|G|1003
9WNR|1|A|A|1004
9WNR|1|A|A|1005
9WNR|1|A|G|1006
9WNR|1|A|U|1007
*
9WNR|1|A|A|1022
9WNR|1|A|U|1023
9WNR|1|A|G|1024
9WNR|1|A|U|1025
9WNR|1|A|G|1026
9WNR|1|A|C|1027
*
9WNR|1|A|G|1034
9WNR|1|A|A|1035
9WNR|1|A|A|1036
9WNR|1|A|C|1037
9WNR|1|A|C|1038

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14