J3_9WW4_039
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- (OMC)UGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9WW4|1|BA|A|1454, 9WW4|1|BA|U|1477
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW4|1|BA|OMC|1391
9WW4|1|BA|U|1392
9WW4|1|BA|G|1393
9WW4|1|BA|G|1394
9WW4|1|BA|C|1395
*
9WW4|1|BA|G|1450
9WW4|1|BA|G|1451
9WW4|1|BA|A|1452
9WW4|1|BA|C|1453
9WW4|1|BA|A|1454
9WW4|1|BA|A|1455
9WW4|1|BA|G|1456
*
9WW4|1|BA|C|1470
9WW4|1|BA|C|1471
9WW4|1|BA|C|1472
9WW4|1|BA|G|1473
9WW4|1|BA|A|1474
9WW4|1|BA|G|1475
9WW4|1|BA|A|1476
9WW4|1|BA|U|1477
9WW4|1|BA|U|1478
9WW4|1|BA|G|1479
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BE
- 40S ribosomal protein S3
- Chain BF
- 40S ribosomal protein S5
- Chain BL
- 40S ribosomal protein S16
- Chain BO
- 40S ribosomal protein S20
- Chain BS
- 40S ribosomal protein S28
- Chain BT
- 40S ribosomal protein S29
- Chain BU
- Receptor of activated protein C kinase 1
- Chain Bh
- 40S ribosomal protein S17
Coloring options: