J3_9WW6_003
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- CGAUAGUCAACAAGUAC*GGAAAG*CUCG
- Length
- 27 nucleotides
- Bulged bases
- 9WW6|1|AA|U|354, 9WW6|1|AA|A|362, 9WW6|1|AC|C|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|C|351
9WW6|1|AA|G|352
9WW6|1|AA|A|353
9WW6|1|AA|U|354
9WW6|1|AA|A|355
9WW6|1|AA|G|356
9WW6|1|AA|U|357
9WW6|1|AA|C|358
9WW6|1|AA|A|359
9WW6|1|AA|A|360
9WW6|1|AA|C|361
9WW6|1|AA|A|362
9WW6|1|AA|A|363
9WW6|1|AA|G|364
9WW6|1|AA|U|365
9WW6|1|AA|A|366
9WW6|1|AA|C|367
*
9WW6|1|AA|G|374
9WW6|1|AA|G|375
9WW6|1|AA|A|376
9WW6|1|AA|A|377
9WW6|1|AA|A|378
9WW6|1|AA|G|379
*
9WW6|1|AC|C|21
9WW6|1|AC|U|22
9WW6|1|AC|C|23
9WW6|1|AC|G|24
Current chains
- Chain AA
- 28S rRNA (3773-MER)
- Chain AC
- 5.8S rRNA (156-MER)
Nearby chains
- Chain AF
- Large ribosomal subunit protein uL4
- Chain Aa
- 60S ribosomal protein L26
- Chain Al
- 60S ribosomal protein L37
- Chain An
- 60S ribosomal protein L39
Coloring options: