J3_9WW6_012
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GAAG*CC(A2M)UAUC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 9WW6|1|AA|U|2788, 9WW6|1|AA|A|2789, 9WW6|1|AA|U|2790
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|G|2402
9WW6|1|AA|A|2403
9WW6|1|AA|A|2404
9WW6|1|AA|G|2405
*
9WW6|1|AA|C|2785
9WW6|1|AA|C|2786
9WW6|1|AA|A2M|2787
9WW6|1|AA|U|2788
9WW6|1|AA|A|2789
9WW6|1|AA|U|2790
9WW6|1|AA|C|2791
*
9WW6|1|AA|G|2800
9WW6|1|AA|U|2801
9WW6|1|AA|C|2802
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain Ai
- 60S ribosomal protein L34
- Chain Al
- 60S ribosomal protein L37
- Chain An
- 60S ribosomal protein L39
Coloring options: