J3_9WW6_019
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- (OMG)UC*GCCUUACGAUCC*(OMG)GUGUC
- Length
- 21 nucleotides
- Bulged bases
- 9WW6|1|AA|C|4337, 9WW6|1|AA|U|4374
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|OMG|4228
9WW6|1|AA|U|4229
9WW6|1|AA|C|4230
*
9WW6|1|AA|G|4331
9WW6|1|AA|C|4332
9WW6|1|AA|C|4333
9WW6|1|AA|U|4334
9WW6|1|AA|U|4335
9WW6|1|AA|A|4336
9WW6|1|AA|C|4337
9WW6|1|AA|G|4338
9WW6|1|AA|A|4339
9WW6|1|AA|U|4340
9WW6|1|AA|C|4341
9WW6|1|AA|C|4342
*
9WW6|1|AA|OMG|4370
9WW6|1|AA|G|4371
9WW6|1|AA|U|4372
9WW6|1|AA|G|4373
9WW6|1|AA|U|4374
9WW6|1|AA|C|4375
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AS
- 60S ribosomal protein L18
- Chain AV
- 60S ribosomal protein L21
- Chain Ac
- Large ribosomal subunit protein uL15
- Chain Aq
- 60S ribosomal protein L36a
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