J3_9WW6_025
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- CAAAG*CGC(A2M)AAUUA*U(A2M)GUGA(OMC)G
- Length
- 22 nucleotides
- Bulged bases
- 9WW6|1|BA|U|488, 9WW6|1|BA|A|516
- QA status
- Modified nucleotides: A2M, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|BA|C|37
9WW6|1|BA|A|38
9WW6|1|BA|A|39
9WW6|1|BA|A|40
9WW6|1|BA|G|41
*
9WW6|1|BA|C|481
9WW6|1|BA|G|482
9WW6|1|BA|C|483
9WW6|1|BA|A2M|484
9WW6|1|BA|A|485
9WW6|1|BA|A|486
9WW6|1|BA|U|487
9WW6|1|BA|U|488
9WW6|1|BA|A|489
*
9WW6|1|BA|U|511
9WW6|1|BA|A2M|512
9WW6|1|BA|G|513
9WW6|1|BA|U|514
9WW6|1|BA|G|515
9WW6|1|BA|A|516
9WW6|1|BA|OMC|517
9WW6|1|BA|G|518
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BB
- 40S ribosomal protein S4, X isoform
- Chain BQ
- 40S ribosomal protein S23
- Chain BX
- 40S ribosomal protein S9
- Chain Bc
- 40S ribosomal protein S24
Coloring options: