J3_9XFK_018
3D structure
- PDB id
- 9XFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of bacterial 50S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9XFK|1|I|U|2833, 9XFK|1|I|A|2835, 9XFK|1|I|U|2884
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9XFK|1|I|G|2812
9XFK|1|I|A|2813
9XFK|1|I|A|2814
9XFK|1|I|C|2815
*
9XFK|1|I|G|2831
9XFK|1|I|U|2832
9XFK|1|I|U|2833
9XFK|1|I|G|2834
9XFK|1|I|A|2835
9XFK|1|I|U|2836
*
9XFK|1|I|A|2882
9XFK|1|I|A|2883
9XFK|1|I|U|2884
9XFK|1|I|G|2885
9XFK|1|I|A|2886
9XFK|1|I|A|2887
9XFK|1|I|C|2888
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain L
- Large ribosomal subunit protein uL3
- Chain V
- Large ribosomal subunit protein bL17
- Chain a
- 50S ribosomal protein L22
- Chain i
- Large ribosomal subunit protein bL32
Coloring options: