J3_9Y49_017

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGAU*AGU*AGGGUGUAAAU

Length

19 nucleotides

Bulged bases

9Y49|1|A6|A|2553, 9Y49|1|A6|U|2761

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|2550
9Y49|1|A6|A|2551
9Y49|1|A6|G|2552
9Y49|1|A6|A|2553
9Y49|1|A6|U|2554
*
9Y49|1|A6|A|2573
9Y49|1|A6|G|2574
9Y49|1|A6|U|2575
*
9Y49|1|A6|A|2757
9Y49|1|A6|G|2758
9Y49|1|A6|G|2759
9Y49|1|A6|G|2760
9Y49|1|A6|U|2761
9Y49|1|A6|G|2762
9Y49|1|A6|U|2763
9Y49|1|A6|A|2764
9Y49|1|A6|A|2765
9Y49|1|A6|A|2766
9Y49|1|A6|U|2767

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain CZ

60S ribosomal protein L27

Chain Cg

60S ribosomal protein L34