3D structure

PDB id
9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UAUC*GUU*ACUAAUA
Length
14 nucleotides
Bulged bases
9Y49|1|A6|A|4464, 9Y49|1|A6|U|4465
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Y49|1|A6|U|4463
9Y49|1|A6|A|4464
9Y49|1|A6|U|4465
9Y49|1|A6|C|4466
*
9Y49|1|A6|G|4491
9Y49|1|A6|U|4492
9Y49|1|A6|U|4493
*
9Y49|1|A6|A|4507
9Y49|1|A6|C|4508
9Y49|1|A6|U|4509
9Y49|1|A6|A|4510
9Y49|1|A6|A|4511
9Y49|1|A6|U|4512
9Y49|1|A6|A|4513

Current chains

Chain A6
LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5
Large subunit ribosomal RNA; LSU rRNA
Chain CB
60S ribosomal protein L3
Chain CO
60S ribosomal protein L13a
Chain CV
60S ribosomal protein L23

Coloring options:

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