J3_9Y49_026

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

9Y49|1|A6|C|4990, 9Y49|1|A6|A|5061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|4970
9Y49|1|A6|A|4971
9Y49|1|A6|U|4972
*
9Y49|1|A6|G|4986
9Y49|1|A6|C|4987
9Y49|1|A6|U|4988
9Y49|1|A6|U|4989
9Y49|1|A6|C|4990
9Y49|1|A6|U|4991
*
9Y49|1|A6|A|5060
9Y49|1|A6|A|5061
9Y49|1|A6|G|5062
9Y49|1|A6|G|5063

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain CB

60S ribosomal protein L3

Chain CP

60S ribosomal protein L17

Chain Cd

60S ribosomal protein L31