J3_9Y49_033

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAG*CAGG*CCUGGAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|A|816
9Y49|1|B2|G|817
9Y49|1|B2|A|818
9Y49|1|B2|G|819
*
9Y49|1|B2|C|829
9Y49|1|B2|A|830
9Y49|1|B2|G|831
9Y49|1|B2|G|832
*
9Y49|1|B2|C|842
9Y49|1|B2|C|843
9Y49|1|B2|U|844
9Y49|1|B2|G|845
9Y49|1|B2|G|846
9Y49|1|B2|A|847
9Y49|1|B2|U|848

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AY

40S ribosomal protein S24