J3_9Y49_037

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGGA*UAC*GGGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|U|1225
9Y49|1|B2|G|1226
9Y49|1|B2|G|1227
9Y49|1|B2|A|1228
*
9Y49|1|B2|U|1530
9Y49|1|B2|A|1531
9Y49|1|B2|C|1532
*
9Y49|1|B2|G|1638
9Y49|1|B2|G|1639
9Y49|1|B2|G|1640
9Y49|1|B2|A|1641

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AF

40S ribosomal protein S5

Chain AQ

40S ribosomal protein S16

Chain AS

40S ribosomal protein S18

Chain AT

40S ribosomal protein S19

Chain tR

Transfer RNA; tRNA