J3_9Y49_038
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUAAUUU*GGGAAACCUCAC*GGCUG
- Length
- 25 nucleotides
- Bulged bases
- 9Y49|1|B2|A|1240, 9Y49|1|B2|G|1256, 9Y49|1|B2|A|1258, 9Y49|1|B2|A|1260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y49|1|B2|C|1237
9Y49|1|B2|U|1238
9Y49|1|B2|U|1239
9Y49|1|B2|A|1240
9Y49|1|B2|A|1241
9Y49|1|B2|U|1242
9Y49|1|B2|U|1243
9Y49|1|B2|U|1244
*
9Y49|1|B2|G|1255
9Y49|1|B2|G|1256
9Y49|1|B2|G|1257
9Y49|1|B2|A|1258
9Y49|1|B2|A|1259
9Y49|1|B2|A|1260
9Y49|1|B2|C|1261
9Y49|1|B2|C|1262
9Y49|1|B2|U|1263
9Y49|1|B2|C|1264
9Y49|1|B2|A|1265
9Y49|1|B2|C|1266
*
9Y49|1|B2|G|1516
9Y49|1|B2|G|1517
9Y49|1|B2|C|1518
9Y49|1|B2|U|1519
9Y49|1|B2|G|1520
Current chains
- Chain B2
- 18S rRNA (1786-MER)
Nearby chains
- Chain AP
- 40S ribosomal protein S15
- Chain AS
- 40S ribosomal protein S18
- Chain AU
- 40S ribosomal protein S20
- Chain Ad
- 40S ribosomal protein S29
- Chain Af
- 40S ribosomal protein S27a
Coloring options: