J3_9YQ0_031

3D structure

PDB id

9YQ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 2, Structure Ib

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAGAG*CAG*UGGAUA

Length

14 nucleotides

Bulged bases

9YQ0|1|9|A|847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ0|1|9|U|815
9YQ0|1|9|A|816
9YQ0|1|9|G|817
9YQ0|1|9|A|818
9YQ0|1|9|G|819
*
9YQ0|1|9|C|829
9YQ0|1|9|A|830
9YQ0|1|9|G|831
*
9YQ0|1|9|U|844
9YQ0|1|9|G|845
9YQ0|1|9|G|846
9YQ0|1|9|A|847
9YQ0|1|9|U|848
9YQ0|1|9|A|849

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4 (S4 X isoform)

Chain JJ

Ribosomal protein S9 (Predicted)

Chain YY

40S ribosomal protein S24