J3_9YQ1_022
3D structure
- PDB id
- 9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Vacant ribosome with P-site tRNA, substate 3, Structure Ic
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUC*GUU*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 9YQ1|1|5|A|4464, 9YQ1|1|5|U|4465
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YQ1|1|5|U|4463
9YQ1|1|5|A|4464
9YQ1|1|5|U|4465
9YQ1|1|5|C|4466
*
9YQ1|1|5|G|4491
9YQ1|1|5|U|4492
9YQ1|1|5|U|4493
*
9YQ1|1|5|A|4507
9YQ1|1|5|C|4508
9YQ1|1|5|U|4509
9YQ1|1|5|A|4510
9YQ1|1|5|A|4511
9YQ1|1|5|U|4512
9YQ1|1|5|A|4513
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein L3
- Chain V
- Ribosomal protein L23
Coloring options: